CVS log for wip/emboss-base/Makefile.common

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Keyword substitution: kv
Default branch: MAIN

Adopt X11.

Mechanically replace references to graphics/jpeg with the suitable
alternative from mk/jpeg.buildlink3.mk

This allows selection of an alternative jpeg library (namely the x86 MMX,
SSE, SSE2 accelerated libjpeg-turbo) via JPEG_DEFAULT=libjpeg-turbo, and
follows the current standard model for alternatives (fam, motif, fuse etc).

The mechanical edits were applied via the following script:

#!/bin/sh
for d in *; do
  [ -d "$d" ] || continue
  for i in "$d/"Makefile* "$d/"*.mk; do
    case "$i" in *.orig|*"*"*) continue;; esac
    out="$d/x"
    sed -e 's;graphics/jpeg/buildlink3\.mk;mk/jpeg.buildlink3.mk;g' \
        -e 's;BUILDLINK_PREFIX\.jpeg;JPEGBASE;g' \
        < "$i" > "$out"
    if cmp -s "$i" "$out"; then
      rm -f "$out"
    else
      echo "Edited $i"
      mv -f "$i" "$i.orig" && mv "$out" "$i"
    fi
  done
done

This commit brought to you by the automated whitespace police (pkglint)

Regen PLIST to fix bulk build failure.
Clean up buildlink and Makefiles to fix some pkglint gripes.

Follow redirects in HOMEPAGEs (and, in some cases, MASTER_SITEs too).

Makefile updated to reflect change in x11 variable from USE_X11 to x11.buildlink3.mk

updated MASTER_SITES

Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used.

changed pngdriver= PREFIX to pngdriver= BUILDLINK_PREFIX.png

EMBOSS stands for The European Molecular Biology Open Software Suite and is  a new, free Open Source software analysis  package specially developed for the needs of  the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive  libraries are provided with the  package, it is a platform to allow other scientists to  develop and  release software in true open  source spirit.  EMBOSS also  integrates a range  of currently available packages and tools for sequence analysis into a seamless whole.

Initial revision